compute.adjacency.matrix | Computes the adjacency matrix of a multiplex network |
compute.transition.matrix | Computes the transition matrix of a multiplex and heterogeneous network |
create.multiplex | Create multiplex graphs from individual networks |
create.multiplex.default | Create multiplex graphs from individual networks |
create.multiplexHet | Create multiplex heterogeneous graphs from individual networks |
create.multiplexHet.default | Create multiplex heterogeneous graphs from individual networks |
create.multiplexHetNetwork.topResults | Creates a Network with the top results of the Random Walk with restart on a Multiplex and Heterogeneous Network |
create.multiplexNetwork.topResults | Creates a Network with the top results of the Random Walk with restart on a Multiplex Network |
Disease_Network | A disease-disease similarity network. |
GeneDiseaseRelations | Diseases and their causative genes |
isMultiplex | Is this R object a Multiplex object? |
isMultiplexHet | Is this R object a Multiplex Heterogeneous object? |
isRWRMH_Results | Is this R object a RWR on Multiplex-Heterogeneous object (Results of the RWR-MH)? |
isRWRM_Results | Is this R object a RWR on Multiplex object (Results of the RWR-M)? |
normalize.multiplex.adjacency | Computes column normalization of an adjacency matrix |
Pathway_Network | A pathway network (Pathway network) |
PPI_Network | A protein-protein physical interaction network (PPI network) |
Random.Walk.Restart.Multiplex | Performs Random Walk with Restart on a Multiplex Network |
Random.Walk.Restart.Multiplex.default | Performs Random Walk with Restart on a Multiplex Network |
Random.Walk.Restart.MultiplexHet | Performs Random Walk with Restart on a Multiplex and Heterogeneous Network |
Random.Walk.Restart.MultiplexHet.default | Performs Random Walk with Restart on a Multiplex and Heterogeneous Network |