RTopper-package |
A package to perform run Gene Set Enrichment across genomic platforms |
adjustPvalGSE |
Multiple testing correction |
combineGSE |
Combines GSE results |
computeDrStat |
Computes gene-to-phenotype associations scores |
convertToDr |
Converts genomic data to a list suitable for computing gene-to-phenotype scores |
dat |
A test dataset for the RTopper package |
fgsList |
A list of Functional Gene Set (FGS) to be used to run the examples in the RTopper package |
gseResultsSep |
A list of separated gene set enrichment p-values to be used to run the examples in the RTopper package |
intScores |
A list of genomic scores integrated across distinct data sets to be used to run the examples in the RTopper package |
pheno |
A test dataset for the RTopper package |
RTopper |
A package to perform run Gene Set Enrichment across genomic platforms |
runBatchGSE |
To perform GSE analysis over multipple experiments and functional themes |
sepScores |
A list of separate gene-to-phenotype association scores, obtained indipendently for each distinct data set to be used to run the examples in the RTopper package |