combineSubsamples |
combine multiple subsamples objects |
generateSubsampledMatrix |
Generate the read matrix corresponding to a particular level |
getSeed |
Extract the global random seed from a subsamples object |
hammer |
ExpressionSet results from Hammer et al 2010 |
plot.subsamples |
plot metrics as a function of subsampled read depth |
plot.summary.subsamples |
plot metrics as a function of subsampled read depth |
ss |
Subsampling results using the hammer dataset |
subsample |
Subsample reads and perform statistical testing on each sample |
summary.subsamples |
calculate summary statistics for each subsampled depth in a subsamples object |