CNVPanelizer-package | Reliable CNV detection in targeted sequencing applications |
Background | Background |
BedToGenomicRanges | BedToGenomicRanges |
BootList | BootList |
CNVPanelizer | Reliable CNV detection in targeted sequencing applications |
CNVPanelizerFromReadCounts | CNVPanelizerFromReadCounts |
CNVPanelizerFromReadCountsHELPER | CNVPanelizerFromReadCountsHELPER |
CollectColumnFromAllReportTables | CollectColumnFromAllReportTables |
CombinedNormalizedCounts | CombinedNormalizedCounts |
IndexMultipleBams | IndexMultipleBams |
NormalizeCounts | NormalizeCounts |
PlotBootstrapDistributions | PlotBootstrapDistributions |
ReadCountsFromBam | ReadCountsFromBam |
ReadXLSXToList | ReadXLSXToList |
referenceReadCounts | Reference sample data |
ReportTables | ReportTables |
RunCNVPanelizerShiny | RunCNVPanelizerShiny |
sampleReadCounts | Test sample data |
SelectReferenceSetByInterquartileRange | SelectReferenceSetByInterquartileRange |
SelectReferenceSetByKmeans | SelectReferenceSetByKmeans |
SelectReferenceSetByPercentil | SelectReferenceSetByPercentil |
SelectReferenceSetFromReadCounts | SelectReferenceSetFromReadCounts |
StatusHeatmap | StatusHeatmap |
WriteListToXLSX | WriteListToXLSX |