# Supervised mutational signatures

## Documentation for package ‘supersigs’ version 1.1.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

example_dt | Example dataset of mutations
get_signature | Function to obtain a SuperSig
make_matrix | Function to transform mutations into "matrix" format
partial_signature | Function to remove the contribution of a SuperSig
predict_signature | Function to predict using SuperSig object
process_vcf | Function to transform VCF object into "matrix" format
simplify_signature | Function to simplify signature representation into interpretable labels for visualization purposes
SuperSig | An S4 class for SuperSig
SuperSig-class | An S4 class for SuperSig
supersig_ls | Trained SuperSigs from TCGA