EBcoexpress

DOI: 10.18129/B9.bioc.EBcoexpress    

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see EBcoexpress.

EBcoexpress for Differential Co-Expression Analysis

Bioconductor version: 3.13

An Empirical Bayesian Approach to Differential Co-Expression Analysis at the Gene-Pair Level

Author: John A. Dawson

Maintainer: John A. Dawson <jadawson at wisc.edu>

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("EBcoexpress")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EBcoexpress")

 

PDF	R Script	EBcoexpress Demo
PDF		Reference Manual

Details

biocViews	Bayesian, Software
Version	1.36.0
In Bioconductor since	BioC 2.10 (R-2.15) (9.5 years)
License	GPL (>= 2)
Depends	EBarrays, mclust, minqa
Imports
LinkingTo
Suggests	graph, igraph, colorspace
SystemRequirements
Enhances
URL
Depends On Me	SRGnet
Imports Me
Suggests Me	dcanr
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	EBcoexpress_1.36.0.tar.gz
Windows Binary	EBcoexpress_1.36.0.zip
macOS 10.13 (High Sierra)	EBcoexpress_1.36.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/EBcoexpress
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/EBcoexpress
Package Short Url	https://bioconductor.org/packages/EBcoexpress/
Package Downloads Report	Download Stats