graph_from_op {wppi} | R Documentation |
Creation of igraph object from PPI OmniPath database with information regarding proteins and gene symbols.
graph_from_op(op_data)
op_data |
Data frame (tibble) of OmniPath PPI interactions from
|
Igraph PPI graph object with vertices defined by UniProt ID and Gene Symbol, and edges based on interactions, for all connections in OmniPath.
graph_op <- graph_from_op(wppi_omnipath_data()) edges_op <- igraph::E(graph_op) vertices_op <- igraph::V(graph_op)