splatPopParseVCF {splatter} | R Documentation |
Extract numeric alleles from vcf object and filter out SNPs missing genotype data or outside the Minor Allele Frequency range in 'SplatPopParams'.
splatPopParseVCF(vcf, params)
vcf |
VariantAnnotation object containing genotypes of samples. |
params |
SplatPopParams object containing parameters for population
scale simulations. See |
Genotype data.frame