computeMedianCV_SCoPE2 {scp}R Documentation

(Deprecated) Compute the median coefficient of variation (CV) per cell

Description

This function is deprecated and should no longer be used. To reproduce the SCoPE2 script, you can now use medianCVperCell with the following arguments:

Usage

computeMedianCV_SCoPE2(object, i, peptideCol, proteinCol, batchCol)

Arguments

object

NULL

i

NULL

peptideCol

NULL

proteinCol

NULL

batchCol

NULL

Details

Make sure to provide the peptide data from separate assays so that the normalization factors are computed per batch.


[Package scp version 1.2.0 Index]