mbiasplot {scmeth} | R Documentation |
Plot the methylation at each position of the read to observe any biases in the methylation based on the read position
mbiasplot(dir = NULL, mbiasFiles = NULL)
dir |
directory name with mbias files |
mbiasFiles |
list of mbias files |
Returns a list containing the methylation across the read position in original top and original bottom strand both in forward and reverse reads for multiple samples
mbiasFile <- '2017-04-21_HG23KBCXY_2_AGGCAGAA_TATCTC_pe.M-bias.txt' mbiasplot(mbiasFiles=system.file("extdata", mbiasFile, package='scmeth'))