regulondb {regutools} | R Documentation |
The build_regulondb function is a constructor function of a regulondb class.
regulondb(database_conn, organism, genome_version, database_version)
database_conn |
A
SQLiteConnection-class connection to
the RegulonDB database made with |
organism |
A character vector with the name of the organism of the database. |
genome_version |
A character vector with the version of the genome build. |
database_version |
A character vector with the version of regulondb build. |
A regulondb object.
## Connect to the RegulonDB database if necessary if (!exists("regulondb_conn")) regulondb_conn <- connect_database() ## Build a regulondb object e_coli_regulondb <- regulondb( database_conn = regulondb_conn, organism = "E.coli", database_version = "1", genome_version = "1" )