processBiogrid {rTRM} | R Documentation |
Process a data.frame with BioGRID data into a network for a target organism.
processBiogrid(dblist, org = "human", simplify = TRUE, type = "physical", mimic.old = FALSE)
dblist |
data.frame containing the BioGRID data. |
org |
target organism (default: "human") |
simplify |
whether to eliminate redundant edges (default TRUE) |
type |
type of interaction (physical or genetic) to include (default: "physical") |
mimic.old |
mimic old behavior of processBiogrid() when interactions for multiple species could be retrieved. Used only for testing. |
An igraph object.
Diego Diez