getReferencedIDs {rBiopaxParser} | R Documentation |
This function takes an id and a biopax model as input. The id of every instance that is referenced is returned. If recursive == TRUE this function recurses through all referenced IDs of the referenced instances and so on. "onlyFollowProperties" limits the recursivness to only certain properties, for example follow only complexes or physicalEntities.
getReferencedIDs(biopax, id, recursive = TRUE, onlyFollowProperties = c())
biopax |
A biopax model OR a compatible data.table |
id |
string. ID of the instance |
recursive |
logical |
onlyFollowProperties |
character vector |
Returns a character vector of IDs referenced by the supplied id in the supplied biopax model.
Frank Kramer
# load data data(biopaxexample) listComplexComponents(biopax, id="ex_m_100650") getReferencedIDs(biopax, id="ex_m_100650", recursive=FALSE) getReferencedIDs(biopax, id="ex_m_100650", recursive=TRUE)