plotIndividualModel {pulsedSilac} | R Documentation |
Plot the model fit for a specific protein/peptide in different conditions.
plotIndividualModel(x, ...) ## S4 method for signature 'SilacProteinExperiment' plotIndividualModel(x, modelList, num, returnDataFrame = FALSE) ## S4 method for signature 'SilacPeptideExperiment' plotIndividualModel(x, modelList, num, returnDataFrame = FALSE) ## S4 method for signature 'SilacProteomicsExperiment' plotIndividualModel(x, modelList, num, returnDataFrame = FALSE)
x |
A |
... |
Unused. |
modelList |
A list containing all the model objects, this should be the
output of |
num |
The feature number to be plotted. |
returnDataFrame |
A |
A scatter plot with a fitted line or a data.frame
.
data('wormsPE') wormsPE <- calculateIsotopeFraction(wormsPE, ratioAssay = 'ratio') modelList <- modelTurnover(x = wormsPE[1:10], assayName = 'fraction', formula = 'fraction ~ 1 - exp(-k*t)', start = list(k = 0.02), mode = 'protein', robust = FALSE, returnModel = TRUE) plotIndividualModel(x = wormsPE, modelList = modelList, num = 2)