gseaSignatures-class {phenoTest} | R Documentation |
This object contains de ES (enrichment scores) and simulated ES that will be used in the GSEA (Gene Set Enrichment Analysis) process.
Objects can be created by calls of the form new("gseaSignatures", ...)
.
.Data
:Object of class "list"
.
es
:Object of class "numeric"
Contains the
observed enrichment scores. The ones that were compted from the
data without permuting anything.
es.sim
:Object of class "numeric"
Contains the
enrichment score that were obtained after permutations.
signature
:Object of class "numeric"
The subset
of genes we are interested in.
Class "list"
, from data part.
Class "vector"
, by class "list", distance 2.
Class "AssayData"
, by class "list", distance 2.
No methods defined with class "gseaSignatures" in the signature.
Evarist Planet
showClass("gseaSignatures")