expression_filtering {moanin} | R Documentation |
Utility function to filter out low-expressed genes
expression_filtering(counts, min_counts = 20, min_samples = 3)
counts |
n by p matrix containing the count data. |
min_counts |
integer, corresponding to the minimum number of counts for the gene to be considered expressed in a sample. Default is 20. |
min_samples |
integer, corresponding to the minimum of samples for a gene to be expressed to be included in downstream analyses. |
The filtered counts matrix