Moanin-methods {moanin} | R Documentation |
This is a collection of helper methods for the Moanin class.
## S4 method for signature 'Moanin' group_variable_name(object) ## S4 replacement method for signature 'Moanin' group_variable_name(object) <- value ## S4 method for signature 'Moanin' time_by_group_variable(object) ## S4 method for signature 'Moanin' group_variable(object) ## S4 replacement method for signature 'Moanin' group_variable(object) <- value ## S4 method for signature 'Moanin' time_variable_name(object) ## S4 replacement method for signature 'Moanin' time_variable_name(object) <- value ## S4 method for signature 'Moanin' time_variable(object) ## S4 replacement method for signature 'Moanin' time_variable(object) <- value ## S4 method for signature 'Moanin' degrees_of_freedom(object) ## S4 method for signature 'Moanin' basis_matrix(object) ## S4 method for signature 'Moanin' spline_formula(object) ## S4 method for signature 'Moanin' show(object) ## S4 method for signature 'Moanin,ANY,character,ANY' x[i, j, ..., drop = TRUE] ## S4 method for signature 'Moanin,ANY,logical,ANY' x[i, j, ..., drop = TRUE] ## S4 method for signature 'Moanin,ANY,numeric,ANY' x[i, j, ..., drop = TRUE] ## S4 method for signature 'Moanin' log_transform(object) ## S4 method for signature 'Moanin' get_log_data(object)
object |
An object of class |
value |
replacement value |
x |
|
i, j |
A vector of logical or integer subscripts, indicating the rows and
columns to be subsetted for |
... |
arguments passed to subsetting |
drop |
A logical scalar that is ignored. |
Note that when subsetting the data, the dendrogram information and the co-clustering matrix are lost.
group_variable_name
and time_variable_name
return the
name of the column containing the variable. group_variable
and
time_variable
return the actual variable.
# Load some data data(exampleData) moanin = create_moanin_model(data=testData,meta=testMeta) group_variable_name(moanin) time_variable_name(moanin)