mirRnaHeatmapDiff {mirTarRnaSeq} | R Documentation |
This function draws heatmaps (pheatmaps) for miRNA and mRNA correlation while using default and heatmap for all other parameters
mirRnaHeatmapDiff( finalF, ..., upper_bound = 0, main = "Default mRNA miRNA heatmap", color = c("grey90", viridis::inferno(50)), fontsize = 7 )
finalF |
data.frame results of corMirnaRnaMiranda or corMirnaRna function |
... |
arguments passed onto pheatmap |
upper_bound |
is the upper_bound of the correlation pheatmap scale default is zero user can set to values based on output of correlation result (value) |
main |
is the title of the pheatmap |
color |
default inferno(50) from the library viridis R base, R colorbrewer and viridis compatible |
fontsize |
default is 7 user adjustable |
pheatmap Obj
x <- mirRnaHeatmapDiff(results$corrs, upper_bound = -0.1, color = rainbow(50), fontsize = 10)