diagplotCor {metaseqR2} | R Documentation |
This function uses the read counts matrix to create heatmap or correlogram correlation plots.
diagplotCor(mat, type = c("heatmap", "correlogram"), output = "x11", path = NULL, ...)
mat |
the read counts matrix or data frame. |
type |
create heatmap of correlogram plots. |
output |
one or more R plotting device to direct the
plot result to. Supported mechanisms: |
path |
the path to create output files. |
... |
further arguments to be passed to plot
devices, such as parameter from |
The filename of the pairwise comparisons plot produced if it's a file.
Panagiotis Moulos
dataMatrix <- metaseqR2:::exampleCountData(2000) diagplotCor(dataMatrix,type="heatmap") diagplotCor(dataMatrix,type="correlogram")