selectAnchorsParam {metabCombiner} | R Documentation |
List of default parameters for anchor selection step of main package workflow, which can be used as input for the wrapper functions. See help(selectAnchors) or ?selectAnchors for more details.
selectAnchorsParam( useID = FALSE, tolmz = 0.003, tolQ = 0.3, tolrtq = 0.3, windx = 0.03, windy = 0.03, brackets_ignore = c("(", "[", "{") )
useID |
Choice of using IDs for anchor selection; default: FALSE |
tolmz |
m/z tolerance for ordered pair features; default: 0.003 |
tolQ |
Q tolerance for ordered pair features; default: 0.3 |
tolrtq |
RT quantile tolerance for ordered pair features; default: 0.5 |
windx |
X feature RT window parameter. Default: 0.03 |
windy |
Y feature RT window parameter. Default: 0.03 |
brackets_ignore |
bracket types for ignoring string comparisons |
list of selectAnchors parameters
sa_param <- selectAnchorsParam(tolmz = 0.002, tolQ = 0.2, windy = 0.02)