isoAnnotate {isomiRs}R Documentation

Annotate the rawData of the IsomirDataSeq object

Description

Get the sequence and the name information for each isomiR, and the importance value (isomir_reads/mirna_reads) for each sample.

Usage

isoAnnotate(ids)

Arguments

ids

Object of class IsomirDataSeq.

Details

edit_mature_position represents the position at the mature sequence + nucleotide at reference + nucleotide at isomiR.

Value

data.frame with the sequence, isomir name, and importance for each sample and isomiR.

Examples

data(mirData)
head(isoAnnotate(mirData))

[Package isomiRs version 1.20.0 Index]