fixCompartments {compartmap} | R Documentation |
Invert, or "fix", compartments that have a minimum confidence score (1-min.conf)
fixCompartments(obj, min.conf = 0.8, parallel = FALSE, cores = 1)
obj |
Input RaggedExperiment or output of condenseSE |
min.conf |
Minimum confidence score to use |
parallel |
Whether to run in parallel |
cores |
How many cores to use if running in parallel |
A "fixed" set of compartments