top_rows_overlap-matrix-method {cola} | R Documentation |
Overlap of top rows from different top-value methods
## S4 method for signature 'matrix' top_rows_overlap(object, top_value_method = all_top_value_methods(), top_n = round(0.25*nrow(object)), method = c("euler", "upset", "venn", "correspondance"), fill = NULL, ...)
object |
A numeric matrix. |
top_value_method |
Methods defined in |
top_n |
Number of top rows. |
method |
|
fill |
Filled color for the Euler diagram. The value should be a color vector. Transparency of 0.5 are added internally. |
... |
Additional arguments passed to |
It first calculates scores for every top-value method and make plot by top_elements_overlap
.
No value is returned.
Zuguang Gu <z.gu@dkfz.de>
set.seed(123) mat = matrix(rnorm(1000), nrow = 100) top_rows_overlap(mat, top_n = 25)