importNCLscan {circRNAprofiler} | R Documentation |
The function importNCLscan is specifically designed to read and adapt the NCLscan v1.4 output file (e.g. MyProject.result). Only intragenic circRNAs are kept in the analysis. See https://github.com/TreesLab/NCLscan for more details.
importNCLscan(pathToFile)
pathToFile |
A character string specifying the path to the file containing the detected circRNAs. |
A data frame.
# Path to an example file containing circRNAs detected by NCLscan pathToFile <- system.file("extdata", "nclscan/circRNAs_001.txt", package="circRNAprofiler") # Inner function. # Import circRNAs importNCLscan(pathToFile)