plotBioNetLines {caOmicsV} | R Documentation |
Line plot on caOmicsv bioNetCircos layout. This method plots one track of line for every node. bionetCircos layout and graphic device must be initialized first.
plotBioNetLines(dataValues, outer, inner, maxValue=NULL, minValue=NULL, plotColors=rep("black", ncol(dataValues)))
dataValues |
numeric matrix of plot data |
outer |
non-negative numeric, the outside boundary of plot area from node center |
inner |
non-negative numeric, the inside boundary of plot area from node center |
maxValue |
numeric, the biggest value of plot data |
minValue |
numeric, the smallest value of plot data |
plotColors |
character vector or vector of R specification, colours for each sample |
None
Henry Zhang
data(bionetPlotDemoData) expr <- bionetPlotDemoData$heatmapData[[1]] bioNet <- bc3net(expr) initializeBioNetCircos(bioNet, totalSamples=60) showBioNetNodesLayout() plotBioNetLines(expr, outer=13, inner=2)