Transforms an UMI4C object to a DDS object
UMI4C2dds(umi4c, design = ~condition)
umi4c
UMI4C object as generated by makeUMI4C or the UMI4C constructor.
makeUMI4C
UMI4C
design
A formula or matrix. The formula expresses how the counts for each fragment end depend on the variables in colData. See DESeqDataSet.
formula
matrix
colData
DESeqDataSet
DDS object.