histone_h3k4me1 {SMITE} | R Documentation |
A toy dataset of H3k4me1 peaks from liver ChIP-seq through the encode project. The file is a BED file.
data(histone_h3k4me1)
A data frame with 75448 observations on the following 3 variables.
a character vector specifying chromsome
an integer vector specifying start
an integer vector specifying end
This is a BED file that specifices the consensus locations of three H3K4me1 ChIP-seq experiments performed on normal adult liver.
A dataframe in BED format (chromosome, start, end).
GSM669972, GSM621654, GSM537706
Roadmap Epigenomics Lister R, et al. Nature. 2009 Nov 19;462(7271):315-22 ENCODE Project Consortium. An integrated encyclopedia of DNA elements in the human genome. Nature. 2012 Sep 6;489(7414):57-74.
data(histone_h3k4me1) head(h3k4me1)