rnb.execute.high.coverage.removal {RnBeads} | R Documentation |
Removes methylation sites with a coverage larger than 100 times the 95-percentile of coverage in each sample.
rnb.execute.high.coverage.removal(rnb.set)
rnb.set |
Methylation dataset as an object of type inheriting |
list
of two elements:
"dataset"
The (possibly) modified dataset after retaining sites on autosomes only.
"filtered"
integer
vector storing the indices of all removed sites.
Fabian Mueller