AssayTab-class {Risa} | R Documentation |
"AssayTab"
, a class for maintaing the information of AssayTabThis class maintains information from an AssayTab dataset, including an investigation file, one or more study files, and one or more assay files for each study file.
Objects can be created by calls of the form new("AssayTab", ...)
.
path
Object of class "character"
, it represents the path of the ISA-Tab dataset to which this AssayTab
belongs
study.filename
Object of class "character"
with the filename of the study to which this assay belongs to.
study.identifier
Object of class "character"
with the identifier of the study to which this assay belongs to.
assay.filename
Object of class "character"
with the filename of the assay.
assay.file
Object of class "data.frame"
with the contents of the assay file.
assay.technology.type
Object of class "character"
with the technology type of this assay.
assay.measurement.type
Object of class "character"
with the measurement type of this assay.
assay.names
Object of class "data.frame"
with the assay names for this assay file.
data.filenames
Object of class "data.frame"
with the data filenames.
signature(x = "AssayTab")
: ...
signature(.Object = "AssayTab", full.path="logical")
: returns the raw data filenames for this assay
Alejandra Gonzalez-Beltran, isatools@googlegroups.com
ISATab-class
,ISATab-methods
,
showClass("AssayTab") showClass("MSAssayTab") showClass("MicroarrayAssayTab") showClass("SeqAssayTab") showClass("NMRAssayTab")