plot.cher {Ringo} | R Documentation |
Function for plotting identified Chers (ChIP-enriched regions).
## S4 method for signature 'cher,ExpressionSet' plot(x, y, probeAnno, samples=NULL, extent = 1000, gff = NULL, ...)
x |
object of class |
y |
data object of class |
probeAnno |
object of class |
samples |
which samples to plot, either a numeric vector of
entries in 1 to |
extent |
integer; how many base pairs to the left and right should the plotted genomic region be extended |
gff |
data frame with gene/transcript annotation |
... |
further arguments passed on to function
|
called for generating the plot; invisible(NULL)
Joern Toedling