open_reactome,ReactomeAnalysisResult-method {ReactomeGSA} | R Documentation |
Opens the specified Reactome visualization in the system's default browser.
## S4 method for signature 'ReactomeAnalysisResult' open_reactome(x, n_visualization = 1, ...)
x |
ReactomeAnalysisResult. |
n_visualization |
numeric The index of the visualization to display (default |
... |
Additional parameters passed to downstream functions. |
The opened link
Other ReactomeAnalysisResult functions:
get_result()
,
names,ReactomeAnalysisResult-method
,
pathways()
,
plot_correlations()
,
plot_gsva_heatmap()
,
plot_gsva_pathway()
,
plot_volcano()
,
reactome_links()
,
result_types()
# Note: This function only works with a newly created result # since the visualization links only stay active for 7 days # load an example result library(ReactomeGSA.data) data(griss_melanoma_result) # get the reactome link - this does only work # with new results # open_reactome(griss_melanoma_result)