genePlot {RUVcorr} | R Documentation |
genePlot
plots the means vs. the inter-quantile ranges of the gene
expression values of all genes with the possibility to highlight interesting sets of genes.
genePlot(Y, index = NULL, legend = NULL, col.h = "red", title)
Y |
A matrix of gene expression values or an object of the class |
index |
A vector of indices of genes of interest to be displayed in a different color, if |
legend |
A character string describing the highlighted genes. |
col.h |
The color of the highlighted genes. |
title |
A character string describing the title of the plot. |
genePlot
returns a plot.
Saskia Freytag
Y<-simulateGEdata(500, 500, 10, 2, 5, g=NULL, Sigma.eps=0.1, 250, 100, intercept=FALSE, check.input=TRUE) try(dev.off(), silent=TRUE) par(mar=c(5.1, 4.1, 4.1, 2.1), mgp=c(3, 1, 0), las=0) genePlot(Y, index=1:100, legend="Expressed genes", title="IQR-Mean Plot")