regnetwork_directions {OmnipathR} | R Documentation |
Transcription factor effects from RegNetwork
regnetwork_directions(organism = "human")
organism |
Character: either human or mouse. |
A data frame (tibble) of TF-target interactions with effect signs.
regn_dir <- regnetwork_directions() regn_dir # # A tibble: 3,954 x 5 # source_genesymb. source_entrez target_genesymb. target_entrez # <chr> <chr> <chr> <chr> # 1 AHR 196 CDKN1B 1027 # 2 APLNR 187 PIK3C3 5289 # 3 APLNR 187 PIK3R4 30849 # 4 AR 367 KLK3 354 # 5 ARNT 405 ALDOA 226 # # . with 3,944 more rows, and 1 more variable: effect <dbl>