findNGSPairs {ORFik} | R Documentation |
Find pair of forward and reverse strand wig / bed files and paired end bam files split in two
findNGSPairs( paths, f = c("forward", "fwd"), r = c("reverse", "rev"), format = "wig" )
paths |
a character path at least one .wig / .bed file |
f |
Default (c("forward", "fwd") a character vector for forward direction regex. |
r |
Default (c("reverse", "rev") a character vector for reverse direction regex. |
format |
default "wig", for bed do "bed". Also searches compressions of these variants. |
if not all are paired, return original list, if they are all paired, return a data.table with matches as 2 columns