NBSpliceRes {NBSplice} | R Documentation |
NBSpliceRes
creates an object to store the results of differential
expression analysis performed by the NBTest function.
NBSpliceRes(results, lowExpIndex, contrast, dispersion)
results |
Data.frame with NBTest results of expressed isoforms. |
lowExpIndex |
Numeric indicating the positions of low expressed isoforms. |
contrast |
Character indicating the contrast used for NBTest. |
dispersion |
Numeric with the estimated gene dispersions. |
NBSpliceRes object.
see full example in NBSpliceRes-class
Gabriela A. Merino merino.gabriela33@gmail.com, and Elmer A. Fernandez efernandez@bdmg.com.ar
Other NBSpliceRes: GetDSGenes
,
GetDSResults
, GetGeneResults
,
NBSpliceRes-class
,
NBSpliceRes-initialize
,
myDSResults
, plotGeneResults
,
plotRatiosDisp
, plotVolcano
data(myDSResults, package="NBSplice") myResults<-results(myDSResults, filter=FALSE) myLowExpIdx<-lowExpIndex(myDSResults) myContrast<-contrast(myDSResults) myDispersion<-disp(myDSResults) myNewDSResults<-NBSpliceRes(myResults, myLowExpIdx, myContrast, myDispersion)