qtlManhattanPlot {MAGAR} | R Documentation |
This function creates a manhattan plot for the given methQTL result
qtlManhattanPlot(meth.qtl.result, type = "CpG", stat = "p.val.adj.fdr")
meth.qtl.result |
An object of type |
type |
Determines if either the CpG (default) or the SNP is to be visualized |
stat |
Determines the statistic that is to be visualized. Can be either |
A plot is shown that contains chromosome-wise interactions.
None
Michael Scherer
meth.qtl.res <- loadMethQTLResult(system.file("extdata","MethQTLResult_chr18",package="MAGAR")) qtlManhattanPlot(meth.qtl.res)