evalLogLikZINB_comp {LineagePulse} | R Documentation |
Pre-compile heavily used functions. Refer to evalLogLikZINB
evalLogLikZINB_comp(vecCounts, vecMu, vecDisp, vecPi, vecidxNotZero, vecidxZero)
vecCounts |
(count vector number of samples) Observed read counts, not observed are NA. |
vecMu |
(vector number of samples) Negative binomial mean parameter. |
vecDisp |
(scalar vector number of samples) Negative binomial dispersion parameters. |
vecPi |
(probability vector number of samples) Drop-out rate estimates. |
vecidxNotZero |
(bool vector number of samples) Whether observation is larger than zero. |
vecidxZero |
(bool vector number of samples) Whether observation is zero. |
scaLogLik (scalar) Likelihood under zero-inflated negative binomial model.
David Sebastian Fischer