calcPostDrop_Matrix {LineagePulse} | R Documentation |
Calculates posterior of observation being a drop-out for a matrix.
calcPostDrop_Matrix(matCounts, lsMuModel, lsDispModel, lsDropModel, vecIDs = NULL)
matCounts |
(count matrix genes x cells) Observed read counts, not observed are NA. |
lsMuModel |
(list) Object containing description of gene-wise mean parameter models. |
lsDispModel |
(list) Object containing description of gene-wise dispersion parameter models. |
lsDropModel |
(list) Object containing description of cell-wise drop-out parameter models. |
vecIDs |
(vector of strings) [Default NULL] Gene IDs for which posteriors of drop-out are to be computed. |
matZ (numeric matrix genes x cells) Posterior probability of observation not being generated by drop-out.
David Sebastian Fischer
Called by plotGene
.