modelRatesNF {INSPEcT} | R Documentation |
This method compute confidence intervals for the rates of synthesis, degradation and processing estimated by
newINSPEcT
that will be used to estimate the variability of each rate in ratePvals
method.
modelRatesNF(object, BPPARAM = SerialParam()) ## S4 method for signature 'INSPEcT' modelRatesNF(object, BPPARAM = SerialParam())
object |
An object of class INSPEcT |
BPPARAM |
Parallelization parameters for bplapply. By default SerialParam() |
An object of class INSPEcT with modeled rates
if( Sys.info()["sysname"] != "Windows" ) { nascentInspObj10 <- readRDS(system.file(package='INSPEcT', 'nascentInspObj10.rds')) ## models removal nascentInspObjThreeGenes <- removeModel(nascentInspObj10[1:3]) nascentInspObjThreeGenes <- modelRatesNF(nascentInspObjThreeGenes, BPPARAM=SerialParam()) ## view modeled synthesis rates viewModelRates(nascentInspObjThreeGenes, 'synthesis') ## view gene classes geneClass(nascentInspObjThreeGenes) }