getbootstrapdata {EventPointer} | R Documentation |
Function to load the values of the bootstrap returned by kallisto or salmon pseudoaligners.
getbootstrapdata(PathSamples, type)
PathSamples |
A vector with the complete directory to the folder of the output of kallisto/salmon. |
type |
'kallisto' or 'salmon'. |
A list containing the quantification data with the bootstrap information.
PathSamples<-system.file("extdata",package="EventPointer") PathSamples <- paste0(PathSamples,"/output") PathSamples <- dir(PathSamples,full.names = TRUE) data_exp <- getbootstrapdata(PathSamples = PathSamples,type = "kallisto")