x.signature.filtered.optimal {DeconRNASeq}R Documentation

selected signatures from multi-tissues pure samples

Description

A data frame providing the expression values from pure brain, muscle, lung, liver and heart samples used for the example in DeconRNA-Seq.

Usage

x.signature.filtered.optimal

Format

A martix whose rows are gene symbols and columns are RPKM expressions from pure tissues: based on the filtered signature matrix, the optimal number of genes have been selected for the deconvolution according to the condition numbers

Author(s)

Ting Gong tinggong@gmail.com Joseph D. Szustakowski joseph.szustakowski@novartis.com

Examples

data(multi_tissue)

[Package DeconRNASeq version 1.34.0 Index]