theme_DEP2 {DEP} | R Documentation |
theme_DEP2
is the ggplot theme used for plotting
in DEP
with vertical x-axis labels.
theme_DEP2()
ggplot theme
data <- UbiLength data <- data[data$Reverse != '+' & data$Potential.contaminant != '+',] data_unique <- make_unique(data, 'Gene.names', 'Protein.IDs', delim = ';') columns <- grep('LFQ.', colnames(data_unique)) exp_design <- UbiLength_ExpDesign se <- make_se(data_unique, columns, exp_design) filt <- filter_missval(se, thr = 0) plot_numbers(filt) # uses theme_DEP2() style