preprocess_TPM {ChromSCape}R Documentation

Preprocess scExp - Transcripts per Million (TPM)

Description

Preprocess scExp - Transcripts per Million (TPM)

Usage

preprocess_TPM(scExp)

Arguments

scExp

A SingleCellExperiment Object

Value

A SingleCellExperiment object.

Examples


scExp = create_scExp(create_scDataset_raw()$mat,create_scDataset_raw()$annot)
scExp = preprocess_TPM(scExp)
head(SingleCellExperiment::normcounts(scExp))


[Package ChromSCape version 1.2.62 Index]