getBioRegion {ChIPseeker}R Documentation

getBioRegion

Description

prepare a region center on start site of selected feature

Usage

getBioRegion(TxDb = NULL, upstream = 1000, downstream = 1000, by = "gene")

Arguments

TxDb

TxDb

upstream

upstream from start site

downstream

downstream from start site

by

one of 'gene', 'transcript', 'exon', 'intron' , '3UTR' , '5UTR'

Value

GRanges object

Author(s)

Guangchuang Yu


[Package ChIPseeker version 1.28.3 Index]