getTagMatrix {ChIPseeker} | R Documentation |
calculate the tag matrix
getTagMatrix(peak, weightCol = NULL, windows, flip_minor_strand = TRUE)
peak |
peak file or GRanges object |
weightCol |
column name of weight, default is NULL |
windows |
a collection of region with equal size, eg. promoter region. |
flip_minor_strand |
whether flip the orientation of minor strand |
tagMatrix