estLocCor {BiSeq} | R Documentation |
For each location the correlation of this location's z-score to \bar{Z} of its CpG cluster is estimated.
estLocCor(vario.sm)
vario.sm |
Output of |
A list:
variogram |
A variogram matrix, usually created by
|
pValsList |
A list of the test results per CpG cluster. |
sigma.cluster |
The standard deviations of z-scores within each cluster. |
Z.cluster |
The arithmetic means of the z-scores for each cluster. |
length.cluster |
The widths (number of pase pairs) of each cluster. |
Katja Hebestreit
Yoav Benjamini and Ruth Heller (2007): False Discovery Rates for Spatial Signals. American Statistical Association, 102 (480): 1272-81.
makeVariogram
, smoothVariogram
data(betaResultsNull) vario <- makeVariogram(betaResultsNull) vario.sm <- smoothVariogram(vario, sill = 1) locCor <- estLocCor(vario.sm)