Autotuner-class {Autotuner} | R Documentation |
This file contains the skeleton to the Autotuner class used through out Autoutuner.
This object is a generic object designed to run the different functions of the Autotuner package. The slots represent content or data that the package uses throughout the different functions.
time
A list containing vectors of scan time points from each sample.
intensity
A list containing vectors of scan intensity points from each sample.
peaks
Regions within each sample identified as peaks by slidingwindow analysis.
peak_table
A data.frame containing information on each peak after further processing is done to the data.
peak_difference
A data.frame containing information on how peaks are eluted differently over time.
metadata
A data.frame containing metadata for all samples to be run on Autotuner.
file_paths
A string path that leads to the samples to be run on Autotuner.
file_col
A string for the column name of the column within the metadata that has specific sample names.
factorCol
A string for the column name of the column within the metadata that has specific sample class names.