plot.GRangesList {AneuFinder}R Documentation

Plotting function for binned read counts (list)

Description

Make plots for binned read counts (list) from binned.data.

Usage

## S3 method for class 'GRangesList'
plot(x, type = "profile", ...)

Arguments

x

A GRangesList object with binned read counts.

type

Type of the plot, one of c('profile', 'histogram', 'karyogram'). You can also specify the type with an integer number.

karyogram

A karyogram-like chromosome overview with read counts.

histogram

A histogram of read counts.

profile

An profile with read counts.

...

Additional arguments for the different plot types.

Value

A ggplot object.


[Package AneuFinder version 1.20.0 Index]