MUVR_model_plot {AlpsNMR}R Documentation

Deprecated function Model plot

Description

Plot the model (a MUVR object) obtained from rdCV_PLS_RF function. For more information about the multivariate modelling with minimally biased variable selection (MUVR) from the MUVR package, see Shi et al., 2018 (DOI: 10.1093/bioinformatics/bty710).

Usage

MUVR_model_plot(MVObj, model = "mid", factCols, sampLabels, ylim = NULL)

Arguments

MVObj

a MUVR model

model

What type of model to plot ('min', 'mid' or 'max'). Defaults to 'mid'.

factCols

An optional vector with colors for the factor levels (in the same order as the levels).

sampLabels

Sample labels (optional; implemented for classification)

ylim

Optional for imposing y-limits for regression and classification analysis

Value

A plot with the model performance

Examples

message("MUVR is not compatible with Bioconductor, 
use bp_kfold_VIP_analysis method instead")

[Package AlpsNMR version 3.2.3 Index]