predictSmooth {tradeSeq} | R Documentation |
Get smoothers estimated by tradeSeq
along a
grid. This function does not return fitted values but rather the predicted
mean smoother, for a user-defined grid of points.
predictSmooth(models, ...) ## S4 method for signature 'SingleCellExperiment' predictSmooth(models, gene, nPoints = 100) ## S4 method for signature 'list' predictSmooth(models, gene, nPoints = 100)
models |
Either the |
... |
parameters including: |
gene |
Either a vector of gene names or an integer vector, corresponding to the row(s) of the gene(s). |
nPoints |
The number of points used to create the grid along the smoother for each lineage. Defaults to 100. |
A matrix
with estimated averages.
data(gamList, package = "tradeSeq") predictSmooth(models = gamList, gene = 1)