run_all {qckitfastq} | R Documentation |
Will run all functions in the qckitfastq suite and save the data frames and plots to a user-provided directory. Plot names are supplied by default.
run_all(infile, dir)
infile |
Path to gzipped FASTQ file |
dir |
Directory to save results to |
Generate files from all functions
infile <- system.file("extdata", "test.fq.gz", package = "qckitfastq") testfolder <- tempdir() run_all(infile, testfolder)