read_length {qckitfastq} | R Documentation |
Creates a data frame of read lengths and the number of reads with that read length.
read_length(fseq, output_file = NA)
fseq |
a seqTools object produced by seqTools::fastqq on the raw FASTQ file |
output_file |
File to save data frame to. Default NA. |
Data frame of read lengths and number of reads with that length.
infile <- system.file("extdata","test.fq.gz", package = "qckitfastq") fseq <- seqTools::fastqq(infile,k=6) read_len <- read_length(fseq)