plot_overrep_reads {qckitfastq} | R Documentation |
Plot the top 5 seqeunces
plot_overrep_reads(overrep_reads, output_file = NA)
overrep_reads |
the table that sorts the sequence content and corresponding counts in descending order |
output_file |
File to save plot to. Will not write to file if NA. Default NA. |
plot of the top 5 overrepresented sequences
infile <- system.file("extdata", "10^5_reads_test.fq.gz", package = "qckitfastq") overrep_df <- overrep_reads(infile) plot_overrep_reads(overrep_df)