makeMergedSmapData {nanotatoR} | R Documentation |
Merges Bionano SV files to one common SV file
makeMergedSmapData(path, pattern, outpath, fname, dbOutput = c("dataframe", "text"))
path |
character. Path to the solo files. |
pattern |
character. file name pattern for solo files. |
outpath |
character. path for output file if dbOutput = text. |
fname |
character. filename if dbOutput = text. |
dbOutput |
character. Output type. Default text and dataframe. |
Text file containing all the solo SMAP files.
path <- system.file("extdata", "Bionano_config/", package = "nanotatoR") pattern <- "_hg19.txt" mergedSmap <- makeMergedSmapData(path, pattern, dbOutput = "dataframe")