GenoDat-class {inveRsion}R Documentation

Class "GenoDat"

Description

Object that handles genotype data

Objects from the Class

Objects can be created by calls of the form setUpGenoDatFile or setUpGenoDatSNPmat .

Slots

genoDat:

"matrix" . Genotypes

lociPos:

"numeric". Genomic coordinates

alleleSum:

"matrix". Total number of variant alleles in the population per SNP

noMissCount:

"matrix". Total number of subjects with no-missing values

Methods

plot

signature(x = "GenoDat"): Plots minor allele frequency

show

signature(object = "GenoDat"): shows data summary

Author(s)

Alejandro Caceres acaceres@creal.cat

See Also

setUpGenoDatFile, setUpGenoDatSNPmat

Examples

data(gDat)
gDat

[Package inveRsion version 1.36.0 Index]